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en:tutorials:telemac [2021/03/18 14:34] – ylecoarer | en:tutorials:telemac [2022/01/17 11:26] (current) – fzaoui |
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substrate_classification_code=Sandre | substrate_classification_code=Sandre |
substrate_classification_method=coarser-dom | substrate_classification_method=coarser-dominant |
default_values=12, 12 | default_values=12, 12 |
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{{:en:tutorials:tuto_projet_creation.png?700|}} | {{:en:tutorials:tuto_projet_creation.png?700|}} |
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* If necessary, change the <hi #9BFFFF>**Projects folder:**</hi>, by clicking on **[Change folder]**. | * If necessary, change the <hi #9BFFFF>**Projects folder:**</hi>, by clicking on {{:wiki:recherche_fichier_icon.png?20|}}. |
* Enter in <hi #9BFFFF>**Project name:**</hi>: //'Tuto_TELEMAC'//. | * Enter in <hi #9BFFFF>**Project name:**</hi>: //'Tuto_TELEMAC'//. |
* Choose in <hi #9BFFFF>**Project type:**</hi>: //'physique'//. | * Choose in <hi #9BFFFF>**Project type:**</hi>: //'physique'//. |
* Click on **[Create Project]**. | * Click on <hi #47B5E6>**[Create Project]**</hi>. |
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The project is then created and gives you access to new tabs. | The project is then created and gives you access to new tabs. |
{{:en:tutorials:tuto_hyd_creation.png?700|}} | {{:en:tutorials:tuto_hyd_creation.png?700|}} |
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* If this information is valid, you can start the calculation by pressing the **[Create 1 file .hyd]** button. | * If this information is valid, you can start the calculation by pressing the <hi #47B5E6>**[Create 1 file .hyd]**</hi> button. |
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Once the process is complete, a file 'd1_to_d9.hyd' is created. | Once the process is complete, a file 'd1_to_d9.hyd' is created. |
* <hi #9BFFFF>**File (.shp, .gpkg)**</hi>: //'sub_PolygonSandreCoarser-dom.shp'// | * <hi #9BFFFF>**File (.shp, .gpkg)**</hi>: //'sub_PolygonSandreCoarser-dom.shp'// |
* <hi #9BFFFF>**Classification code:**</hi>: //'Sandre'// | * <hi #9BFFFF>**Classification code:**</hi>: //'Sandre'// |
* <hi #9BFFFF>**Classification method:**</hi> : //'coarser-dom'// | * <hi #9BFFFF>**Classification method:**</hi> : //'coarser-dominant'// |
* <hi #9BFFFF>**Default values**</hi> : //'12, 12'// | * <hi #9BFFFF>**Default values**</hi> : //'12, 12'// |
* <hi #9BFFFF>**EPSG code**</hi>: //'2154'// | * <hi #9BFFFF>**EPSG code**</hi>: //'2154'// |
{{:en:tutorials:tuto_sub_creation.png?700|}} | {{:en:tutorials:tuto_sub_creation.png?700|}} |
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* If the information displayed in this tab is valid, you can start the calculation by pressing the **[Create .sub file]** button. | * If the information displayed in this tab is valid, you can start the calculation by pressing the <hi #47B5E6>**[Create .sub file]**</hi> button. |
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Once the process is finished, a file 'sub_PolygonSandreCoarser-dom.sub' is created. | Once the process is finished, a file 'sub_PolygonSandreCoarser-dom.sub' is created. |
==== Creating a .hab file ==== | ==== Creating a .hab file ==== |
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* Stay in the <hi #9BFFFF>**Substrat**</hi> tab. | * Stay in the <hi #9BFFFF>**Substrate**</hi> tab. |
* In the <hi #9BFFFF>**Merging of hydraulics and substrate data**</hi> group, check that the file names are selected for: | * In the <hi #9BFFFF>**Merging of hydraulics and substrate data**</hi> group, check that the file names are selected for: |
* <hi #9BFFFF>**.hyd filename**</hi>: //'d1_to_d9.hyd'//. | * <hi #9BFFFF>**.hyd filename**</hi>: //'d1_to_d9.hyd'//. |
{{:en:tutorials:tuto_hab_creation.png?700|}} | {{:en:tutorials:tuto_hab_creation.png?700|}} |
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* Then launch the merge with the **[Create .hab file]** button. | * Then launch the merge with the <hi #47B5E6>**[Create .hab file]**</hi> button. |
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Once the process is finished, a //'d1_to_d9_sub_PolygonSandreCoarser-dom.hab'// file is created. | Once the process is finished, a //'d1_to_d9_sub_PolygonSandreCoarser-dom.hab'// file is created. |
* Open the tab <hi #9BFFFF>**Calc. Habitat**</hi> tab. | * Open the tab <hi #9BFFFF>**Calc. Habitat**</hi> tab. |
* Check for <hi #9BFFFF>**Habitat File(s)**</hi> that the //'d1_to_d9_sub_PolygonSandreCoarser-dom.hab'// file is selected. | * Check for <hi #9BFFFF>**Habitat File(s)**</hi> that the //'d1_to_d9_sub_PolygonSandreCoarser-dom.hab'// file is selected. |
* To add biological models to be calculated, click on the **[Add Models]** button. | * To add biological models to be calculated, click on the <hi #9BFFFF>**[Add Models]**</hi> button. |
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This opens the [[en:user_guide:explo_biological_models|biological model explorer]]. | This opens the [[en:user_guide:explo_biological_models|biological model explorer]]. |
* In the first tab <hi #9BFFFF>**Model filter**</hi>, refine your search by the following criteria: | * In the first tab <hi #9BFFFF>**Model filter**</hi>, refine your search by the following criteria: |
* <hi #9BFFFF>**Country**</hi>: //'France'//. | * <hi #9BFFFF>**Country**</hi>: //'France'//. |
* <hi #9BFFFF>**Type of aquatic animal**</hi>: //'fish'//. | * <hi #9BFFFF>**Aquatic animal type**</hi>: //'fish'//. |
* <hi #9BFFFF>**Stage and size**</hi>: //'adult'//. | * <hi #9BFFFF>**Stage and size**</hi>: //'adult'//. |
* <hi #9BFFFF>**Code alternative filter**</hi> : //'BAF'//. | * <hi #9BFFFF>**Code alternative filter**</hi> : //'BAF'//. |
* In the second tab <hi #9BFFFF>**Model selection**</hi>: | * In the second tab <hi #9BFFFF>**Model selection**</hi>: |
* Click on the model //'Barbus barbus - adult - BAF01'// in the left-hand list <hi #9BFFFF>**Available models**</hi>. | * Click on the model //'Barbus barbus - adult - BAF01'// in the left-hand list <hi #9BFFFF>**Available models**</hi>. |
* (Optional) You can click on **[Show habitat suitability indices]** to display the biological model in an interactive figure | * (Optional) You can click on <hi #9BFFFF>**[Show habitat suitability indices]**</hi> to display the biological model in an interactive figure |
* Drag and drop from left to right the //'Barbus barbus - adult - BAF01'// model into the right-hand list <hi #9BFFFF>**Selected models (0)**</hi>. | * Drag and drop from left to right the //'Barbus barbus - adult - BAF01'// model into the right-hand list <hi #9BFFFF>**Selected models**</hi>. |
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{{:en:tutorials:tuto_calc_hab_glisser_dep.png?700|}} | {{:en:tutorials:tuto_calc_hab_glisser_dep.png?700|}} |
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* Validate with the **[Validate selected models]** button. | * Validate with the <hi #9BFFFF>**[Validate selected models]**</hi> button. |
The model //'Barbus barbus - adult - BAF01'// has been added to the list of models to be calculated. | The model //'Barbus barbus - adult - BAF01'// has been added to the list of models to be calculated. |
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{{:en:tutorials:tuto_calc_hab.png?700|}} | {{:en:tutorials:tuto_calc_hab.png?700|}} |
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* You can now start the habitat calculation for the adult barbel with the **[Compute habitat]** button. | * You can now start the habitat calculation for the adult barbel with the <hi #47B5E6>**[Compute habitat]**</hi> button. |
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Once the process is finished, the result of the model 'BAF01_adult_HV_Dominant' has been added to the file 'd1_to_d9_sub_PolygonSandreCoarser-dom.hab'. By default, at each calculation, the text habitat calculation result file is created: 'd1_to_d9_sub_PolygonSandreCoarser-dom_spu.txt' describing the habitat values and the weighted usable area of adult barbel for each simulated discharge. | Once the process is finished, the result of the model 'BAF01_adult_HV_Dominant' has been added to the file 'd1_to_d9_sub_PolygonSandreCoarser-dom.hab'. By default, at each calculation, the text habitat calculation result file is created: 'd1_to_d9_sub_PolygonSandreCoarser-dom_spu.txt' describing the habitat values and the weighted usable area of adult barbel for each simulated discharge. |
* <hi #9BFFFF>**mode**</hi>: //'interactive'//. | * <hi #9BFFFF>**mode**</hi>: //'interactive'//. |
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* Start the figure creation process with the **[run]** button. | * Start the figure creation process with the <hi #47B5E6>**[run]**</hi> button. |
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An interactive habitat map is then displayed. | An interactive habitat map is then displayed. |
* In this group <hi #9BFFFF>**Figure viewer/exporter**</hi>, choose: | * In this group <hi #9BFFFF>**Figure viewer/exporter**</hi>, choose: |
* <hi #9BFFFF>**tronçon(s)**</hi>: //'Tronçon D'//. | * <hi #9BFFFF>**tronçon(s)**</hi>: //'Tronçon D'//. |
* <hi #9BFFFF>**discharge [m<sup>3</sup>/s]**</hi>: all discharges (from //'9.2'// to //'259'//). | * <hi #9BFFFF>**discharge [m<sup>3</sup>/s]**</hi></hi>: all discharges (from //'9.2'// to //'259'//). |
* <hi #9BFFFF>**mesh variables**</hi>: //'BAF01_adult_HV_Dominant'//. | * <hi #9BFFFF>**mesh variables**</hi>: //'BAF01_adult_HV_Dominant'//. |
* Figure options: | * Figure options: |
* <hi #9BFFFF>**mode**</hi>: //'interactive'//. | * <hi #9BFFFF>**mode**</hi>: //'interactive'//. |
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* Start the figure creation process with the **[run]** button. | * Start the figure creation process with the <hi #47B5E6>**[run]**</hi> button. |
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An interactive habitat chronicle is then displayed. | An interactive habitat chronicle is then displayed. |
{{:en:tutorials:tuto_data_explorer_export.png?700|}} | {{:en:tutorials:tuto_data_explorer_export.png?700|}} |
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* Start the export process with the **[run]** button. | * Start the export process with the <hi #47B5E6>**[run]**</hi> button. |
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At the end of the process, all the requested files have been exported. | At the end of the process, all the requested files have been exported. |
{{:fr:tutorials:tuto_paraview_stl.png?600|}} | {{:fr:tutorials:tuto_paraview_stl.png?600|}} |
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In a third step, we will look at the exports <hi #9BFFFF>**3D (.pvd, .vtu) Mesh by units**</hi>, namely: | In a third step, we will look at the exports <hi #9BFFFF>**3D (.pvd, .vtu) Mesh units**</hi>, namely: |
* the file 'd1_to_d9_sub_PolygonSandreCoarser-dom_Troncon D_water level.pvd'. | * the file 'd1_to_d9_sub_PolygonSandreCoarser-dom_Troncon D_water level.pvd'. |
* the 'd1_to_d9_sub_PolygonSandreCoarser-dom_Troncon D_XXXX_water level.vtu' files. | * the 'd1_to_d9_sub_PolygonSandreCoarser-dom_Troncon D_XXXX_water level.vtu' files. |
* If necessary, close the <hi #9BFFFF>**Data available**</hi> group. | * If necessary, close the <hi #9BFFFF>**Data available**</hi> group. |
* If necessary, click on the <hi #9BFFFF>**Desired data**</hi> group to open it. | * If necessary, click on the <hi #9BFFFF>**Desired data**</hi> group to open it. |
* Select the discharge chronicle file //'discharge_chronicle.txt'// with the **[run]** button of the group <hi #9BFFFF>**from .txt file**</hi>. | * Select the discharge chronicle file //'discharge_chronicle.txt'// with the <hi #47B5E6>**[load and run]**</hi> button of the group <hi #9BFFFF>**from .txt file**</hi>. |
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{{:en:tutorials:tuto_interp_target.png?700|}} | {{:en:tutorials:tuto_interp_target.png?700|}} |
{{:en:tutorials:tuto_interp_resultgui.png?700|}} | {{:en:tutorials:tuto_interp_resultgui.png?700|}} |
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* Click the **[run]** button of <hi #9BFFFF>**View interpolated chronicle:**</hi> to display the interpolated chronicle. | * Click the <hi #47B5E6>**[run]**</hi> button of <hi #9BFFFF>**View interpolated chronicle:**</hi> to display the interpolated chronicle. |
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{{:en:tutorials:tuto_interp_chronique_mpl.png?500|}} | {{:en:tutorials:tuto_interp_chronique_mpl.png?500|}} |
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